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Mixed State Estimation for a Linear Gaussian Markov Model
Mixed State Estimation Linear Gaussian Markov Model
2015/7/9
We consider a discrete-time dynamical system with Boolean and continuous states, with the continuous state propagating linearly in the continuous and Boolean state variables, and an additive Gaussian ...
A context dependent pair hidden Markov model for statistical alignment
Comparative genomics Contextual alignment DNA sequence alignment EM algorithm
2011/7/19
This article proposes a novel approach to statistical alignment of nucleotide sequences by introducing a context dependent structure on the substitution process in the underlying evolutionary model. W...
Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites
Phylogenetics invariable site model identifiability phylogenetic invariants
2010/4/27
The general Markov plus invariable sites (GM+I) model of biological sequence evolution
is a two-class model in which an unknown proportion of sites are not allowed
to change, while the remainder und...